miRBase entry: bna-MIR169m

Stem-loop bna-MIR169m


Accession
MI0006469
Description
Brassica napus bna-MIR169m precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
11 open access papers mention bna-MIR169m
(42 sentences)

Sequence

uauauguaucagagagucaugcaugggaaaauagagaaugauaaUGAGCCAAAGAUGACUUGCCGauuuuaccaaagaauuuaaaacugauaauggugacuggcaagucgacuuuggcucuguuuccuucucuucuuuucgauguaagacucuagauaucuau
.(((.(((((..((((((.(((((.(((((..((((((.((....(((((((((.((((((((((...((((((...................)))))).)))))))))).)))))))))....)).))))))..))))).))))).)))))).))))).)))

Structure
u   u     ag      a     g     au      u  uaaU         A          auu      aagaauuu 
 aua guauc  agaguc ugcau ggaaa  agagaa ga    GAGCCAAAG UGACUUGCCG   uuacca        a
 ||| |||||  |||||| ||||| |||||  |||||| ||    ||||||||| ||||||||||   ||||||        a
 uau uauag  ucucag augua cuuuu  ucucuu cu    cucgguuuc gcugaacggu   aguggu        a
-   c     -a      a     g     cu      c  uugu         a          --c      aauaguca 


Annotation confidence Not enough data
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Genome context
EM:BZ021311: 350-512 [-]

Database links

Mature bna-miR169m

Accession MIMAT0005624
Description Brassica napus bna-miR169m mature miRNA
Sequence 45 - UGAGCCAAAGAUGACUUGCCG - 65
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17659282
    Cloning and characterization of microRNAs from Brassica napus
    "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
    "FEBS Lett (2007) 581:3848-3856