miRBase entry: bna-MIR167b

Stem-loop bna-MIR167b


Accession
MI0006472
Description
Brassica napus bna-MIR167b precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
8 open access papers mention bna-MIR167b
(31 sentences)

Sequence

ggcgcaccggcaucugaUGAAGCUGCCAGCAUGAUCUAAuuaucuuucuuucucuguugacgauggaaaagacaugaguguugauuagaucauguucgcaguuucacccguugacugucucgcc
((((...(((((.(.(.(((((((((.(((((((((((((((.((((((((.((((((...)))))))))))...)))...))))))))))))))).))))))))).).).)).)))...))))

Structure
    cac   -  u u a         C               --u   ---     c      g 
ggcg   cgg ca c g UGAAGCUGC AGCAUGAUCUAAuua   cuu   ucuuu ucuguu  
||||   ||| || | | ||||||||| |||||||||||||||   |||   ||||| |||||| a
ccgc   guc gu g c acuuugacg uuguacuagauuagu   gag   agaaa agguag  
    ucu   a  u c c         c               ugu   uac     -      c 


Annotation confidence Not enough data
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Genome context
EM:CT022223: 635-758 [-]

Database links

Mature bna-miR167b

Accession MIMAT0005627
Description Brassica napus bna-miR167b mature miRNA
Sequence 18 - UGAAGCUGCCAGCAUGAUCUAA - 39
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17659282
    Cloning and characterization of microRNAs from Brassica napus
    "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
    "FEBS Lett (2007) 581:3848-3856