miRBase entry: bna-MIR166b

Stem-loop bna-MIR166b


Accession
MI0006475
Description
Brassica napus bna-MIR166b precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
10 open access papers mention bna-MIR166b
(32 sentences)

Sequence

aaguucagguggaugaugcuuggcucgagaccauucaauaugaucauugugaugaugaugaugaugaugauaaugauaaugauaaugaugUCGGACCAGGCUUCAUUCCCCucaacuu
(((((.(((.((((((.((((((.((((.(.((((((.(((.((((((((.((....)).)))))))).))).)))........))).).)))).)))))).)))))).))).)))))

Structure
     c   u      u      c    g c   --------   a   g        g  g 
aaguu agg ggauga gcuugg ucga a cau        uca uau aucauugu au a
||||| ||| |||||| |||||| |||| | |||        ||| ||| |||||||| ||  
uucaa uCC CUUACU CGGACC GGCU u gua        agu aua uaguagua ua u
     c   C      U      A    g a   auaguaau   a   g        g  g 


Annotation confidence Not enough data
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Genome context
EM:BH423978: 306-423 [+]

Database links

Mature bna-miR166b

Accession MIMAT0005630
Description Brassica napus bna-miR166b mature miRNA
Sequence 91 - UCGGACCAGGCUUCAUUCCCC - 111
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17659282
    Cloning and characterization of microRNAs from Brassica napus
    "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
    "FEBS Lett (2007) 581:3848-3856