Stem-loop bna-MIR161

Accession

MI0006479

Description

Brassica napus bna-MIR161 precursor miRNA

Gene family

MIPF0000455; MIR161

Literature search

4 open access papers mention bna-MIR161
(5 sentences)

Sequence

uuuauugcuucgaUCAAUGCACUGAAAGUGACUAcaccaggauuuguuuuuaaguuuuugcucucaucuauaugauaaagaugaaaauuagccucugauguagucacuuucaaugcguugaucauagcauggaaa
(((..((((..((((((((((.((((((((((((((.((((....((((((..(((((((...((((....))))))))))))))))).....)))).)))))))))))))).))))))))))..))))..))).

Structure

-   au    uc          C              c    -auuu      aa       cuc    c 
 uuu  ugcu  gaUCAAUGCA UGAAAGUGACUAca cagg     guuuuu  guuuuug   ucau u
 |||  ||||  |||||||||| |||||||||||||| ||||     ||||||  |||||||   ||||  
 aag  acga  cuaguugcgu acuuucacugaugu gucu     uaaaag  uagaaau   agua a
a   gu    ua          a              a    ccgau      --       ---    u 

Annotation confidence Not enough data

Genome context

EM:BZ512955: 329-463 [+]

Mature bna-miR161

• Accession: MIMAT0005634
• Description: Brassica napus bna-miR161 mature miRNA
• Sequence: 14 - UCAAUGCACUGAAAGUGACUA - 34
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856