Accession
MI0006575
Description
Vitis vinifera
vvi-MIR399e precursor miRNA
Gene family
MIPF0000015;
MIR399
Literature search
4 open access papers mention vvi-MIR399e
(11 sentences)
(11 sentences)
Sequence
43
reads,
3
reads per million, 2 experiments
gcauauuacagggcaaauuaucuuuuggcaggcagccacuuagagacacagccaagccaugcauucuuguagugugcccucUGCCAAAGGAGAUUUGCCCGGcaauucuucu
..........(((((((((.((((((((((((..((((((..((((....((........))..))))..)))).))..)))))))))))))))))))))............
..........(((((((((.((((((((((((..((((((..((((....((........))..))))..)))).))..)))))))))))))))))))))............
Structure
--gcauauuaca a ca - ua caca caa
gggcaaauu ucuuuuggcagg gc cacu gaga gc g
||||||||| |||||||||||| || |||| |||| ||
CCCGUUUAG AGGAAACCGUcu cg guga uucu cg c
ucuucuuaacGG - cc u ug --ua uac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr10: 2992220-2992331 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from vvi-MIR399e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature vvi-miR399e
| Accession | MIMAT0005730 |
| Description | Vitis vinifera vvi-miR399e mature miRNA |
| Sequence | 82 - UGCCAAAGGAGAUUUGCCCGG - 102 |
| Evidence | not_experimental |
References
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