Stem-loop sequence mml-mir-513a-2

Accession

MI0006619 (change log)

Description

Macaca mulatta miR-513a-2 stem-loop

Gene family

MIPF0000130; mir-506

Literature search

2 open access papers mention mml-mir-513a-2
(57 sentences)

Stem-loop

   u     g   c    a   gg     uc        gaa 
5'  guaca ugc uuuc cag  aggug  auuuaugu   c
    ||||| ||| |||| |||  |||||  ||||||||    
3'  caugu aug gaag guc  uccac  uaaauaua   u
   a     a   a    a   uu     uu        aaa 

Deep sequencing

1935 reads, 11.1 reads per million, 9 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Mmul_8.0.1; GCA_000772875.3): chrX: 140933333-140933412 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mml-mir-513a-2

• mml-mir-513a-3: chrX: 140941885-140941966 [-]
• mml-mir-513a-2: chrX: 140933333-140933412 [-]
• mml-mir-513a-1: chrX: 140924359-140924440 [-]

Database links

• EntrezGene:MIR513A-2
• miRBase Tracker:MI0006619

Mature sequence mml-miR-513a

• Accession: MIMAT0005768
• Sequence: 13 - uucacagggaggugucauuuau - 34
• Deep sequencing: 2976 reads, 8 experiments
• Evidence: by similarity; MI0003191
• Predicted targets:
  • TargetScanVert:mml-miR-513a

References

1. PMID:17416744 "Rapid evolution of an X-linked microRNA cluster in primates" Zhang R, Peng Y, Wang W, Su B Genome Res. 17:612-617(2007).