miRBase entry: mml-mir-514a

Stem-loop mml-mir-514a


Accession
MI0006621
Description
Macaca mulatta mml-mir-514a precursor miRNA
Gene family
MIPF0000130; mir-506

Literature search
1 open access papers mention mml-mir-514a
(1 sentences)

Sequence

83260 reads, 4254 reads per million, 9 experiments
auguugucugugguacccUACUCUGGAGAGUGACAAUCAuguauaauuaaauuugAUUGACACUUCUGUGAGUAGAguaaugcaugacacgu
((((.(((((((.(((.((((((((((.((((.((((((.((........)).)))))).)))))))).)))))).))).)))).)))))))

Structure
    u   -    g   c      -    G    A      u  aua 
augu guc ugug uac cUACUC UGGA AGUG CAAUCA gu   a
|||| ||| |||| ||| |||||| |||| |||| |||||| ||    
ugca cag acgu aug GAUGAG GUCU UCAC GUUAgu ua   u
    -   u    a   A      U    -    A      u  aau 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chrX: 140981169-140981260 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-514a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-514a-3p

Accession MIMAT0005769
Description Macaca mulatta mml-miR-514a-3p mature miRNA
Sequence 56 - AUUGACACUUCUGUGAGUAGA - 76
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-514a-5p

Accession MIMAT0026748
Description Macaca mulatta mml-miR-514a-5p mature miRNA
Sequence 19 - UACUCUGGAGAGUGACAAUCA - 39
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45