miRBase entry: ptr-mir-508

Stem-loop ptr-mir-508


Accession
MI0006624
Description
Pan troglodytes ptr-mir-508 precursor miRNA
Gene family
MIPF0000130; mir-506

Literature search
1 open access papers mention ptr-mir-508
(24 sentences)

Sequence

ugaguguagugcccuacuccagagggcaucagucauguaaacuaaaacaUGAUUGUAGCCUUUUUGAGUAGAguaauacacauca
((((((((.(((.((((((.(((((((..(((((((((........)))))))))..))))))).)))))).))).))))).)))

Structure
   -     g   c      c       au         aaa 
uga gugua ugc cuacuc agagggc  cagucaugu   c
||| ||||| ||| |||||| |||||||  |||||||||    
acu cacau aug GAUGAG UUUUCCG  GUUAGUaca   u
   a     a   A      U       AU         aaa 


Annotation confidence Not enough data
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Genome context
chrX: 146968308-146968392 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-508
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-508

Accession MIMAT0005772
Description Pan troglodytes ptr-miR-508 mature miRNA
Sequence 50 - UGAUUGUAGCCUUUUUGAGUAGA - 72
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617