miRBase entry: ptr-mir-509b

Stem-loop ptr-mir-509b


Accession
MI0006626
Description
Pan troglodytes ptr-mir-509b precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

cgugcugugugugguacccuacugcagacguggcaaucauguauaauuaaaaaUGAUUGGUACGUCUGUGAGUAGAguacugcaugacacaug
((((.((((((((((((.((((((((((((((.(((((((............))))))).))))))))).))))).))))))))).)))))))

Structure
    c   -         c     -         g       guaua 
cgug ugu gugugguac cuacu gcagacgug caaucau     a
|||| ||| ||||||||| ||||| ||||||||| |||||||      
guac aca uacgucaug GAUGA UGUCUGCAU GUUAGUa     u
    -   g         A     G         G       aaaau 


Annotation confidence Not enough data
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Genome context
chrX: 146990928-146991020 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-509b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-509b

Accession MIMAT0005774
Description Pan troglodytes ptr-miR-509b mature miRNA
Sequence 54 - UGAUUGGUACGUCUGUGAGUAGA - 76
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617