miRBase entry: ptr-mir-509a-2

Stem-loop ptr-mir-509a-2


Accession
MI0006627
Description
Pan troglodytes ptr-mir-509a-2 precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

caugcugugugugguacccuacugcagacaguggcaaucauguauaauuaaaaaUGAUUGGUACGUCUGUGGAUAGAguacugcaugacacaug
((((.((((((((((((.(((((((((((.(((.(((((((............))))))).))))))))))).))).))))))))).)))))))

Structure
    c   -         c   -        a   g       guaua 
caug ugu gugugguac cua cugcagac gug caaucau     a
|||| ||| ||||||||| ||| |||||||| ||| |||||||      
guac aca uacgucaug GAU GGUGUCUG CAU GUUAGUa     u
    -   g         A   A        -   G       aaaau 


Annotation confidence Not enough data
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Genome context
chrX: 146991813-146991906 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-509a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-509a

Accession MIMAT0005773
Description Pan troglodytes ptr-miR-509a mature miRNA
Sequence 55 - UGAUUGGUACGUCUGUGGAUAGA - 77
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617