miRBase entry: ptr-mir-513a-1

Stem-loop ptr-mir-513a-1


Accession
MI0006629
Description
Pan troglodytes ptr-mir-513a-1 precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

ugugcagugccuUUCACAGGGAGGUGUCAUUUAUgugaacuaaaauauaaauuucaccuugcugagaagaguaauguaca
((((((.(((.((((.(((.((((((..((((((((........))))))))..)))))).))).)))).))).))))))

Structure
      g   c    A   G      UC        gaa 
ugugca ugc uUUC CAG GAGGUG  AUUUAUgu   c
|||||| ||| |||| ||| ||||||  ||||||||    
acaugu aug gaag guc uuccac  uaaauaua   u
      a   a    a   g      uu        aaa 


Annotation confidence Not enough data
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Genome context
chrX: 146921621-146921700 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-513a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-513a

Accession MIMAT0005776
Description Pan troglodytes ptr-miR-513a mature miRNA
Sequence 13 - UUCACAGGGAGGUGUCAUUUAU - 34
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617