miRBase entry: ptr-mir-514-2

Stem-loop ptr-mir-514-2


Accession
MI0006634
Description
Pan troglodytes ptr-mir-514-2 precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

uguugucugugguacccuacucuggagagugacaaucauguauaacuaaauuugAUUGACACUUCUGUGAGUAGaguaacgcaugaca
...((((((((.(((.((((((((((.((((.((((((.((........)).)))))).)))))))).)))))).))).)))).))))

Structure
ugu    -    g   c      -    g    a      u  aua 
   uguc ugug uac cuacuc ugga agug caauca gu   a
   |||| |||| ||| |||||| |||| |||| |||||| ||    
   acag acgc aug GAUGAG GUCU UCAC GUUAgu ua   c
---    u    a   a      U    -    A      u  aau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 147013243-147013330 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from ptr-mir-514-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-514

Accession MIMAT0005778
Description Pan troglodytes ptr-miR-514 mature miRNA
Sequence 55 - AUUGACACUUCUGUGAGUAG - 74
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617