miRBase entry: ptr-mir-514-3

Stem-loop ptr-mir-514-3


Accession
MI0006635
Description
Pan troglodytes ptr-mir-514-3 precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

ugucugugguacccuacucuggagagugacaaucauguauaacuaaauuugAUUGACACUUCUGUGAGUAGaguaacgcaugaca
((((((((.(((.((((((((((.((((.((((((.((........)).)))))).)))))))).)))))).))).)))).))))

Structure
    -    g   c      -    g    a      u  aua 
uguc ugug uac cuacuc ugga agug caauca gu   a
|||| |||| ||| |||||| |||| |||| |||||| ||    
acag acgc aug GAUGAG GUCU UCAC GUUAgu ua   c
    u    a   a      U    -    A      u  aau 


Annotation confidence Not enough data
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Genome context
chrX: 147015339-147015423 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from ptr-mir-514-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-514

Accession MIMAT0005778
Description Pan troglodytes ptr-miR-514 mature miRNA
Sequence 52 - AUUGACACUUCUGUGAGUAG - 71
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617