miRBase entry: oan-mir-1330

Stem-loop oan-mir-1330


Accession
MI0006664
Description
Ornithorhynchus anatinus oan-mir-1330 precursor miRNA


Sequence

10 reads, 1 reads per million, 2 experiments
ggauguuugguguucucucuGUACGAUUCGCAUUGCCCAUUauuaauguaacaaugggcaaugcuaauuguaaagagaugcugccauauauucc
((((((.((((((..(((((.(((((((.((((((((((((.(((...))).)))))))))))).))))))).))))).)).)))).)))))).

Structure
-      u    -  uc     G       C            a   a 
 ggaugu uggu gu  ucucu UACGAUU GCAUUGCCCAUU uua  
 |||||| |||| ||  ||||| ||||||| |||||||||||| ||| u
 cuuaua accg cg  agaga auguuaa cguaacggguaa aau  
c      u    u  -u     a       u            c   g 


Annotation confidence Not enough data
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Genome context
1: 29293793-29293886 [+]

Database links

Mature oan-miR-1330

Accession MIMAT0006800
Description Ornithorhynchus anatinus oan-miR-1330 mature miRNA
Sequence 21 - GUACGAUUCGCAUUGCCCAUU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004