miRBase entry: oan-mir-33a

Stem-loop oan-mir-33a


Accession
MI0006674
Description
Ornithorhynchus anatinus oan-mir-33a precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

2046 reads, 42 reads per million, 5 experiments
gccgcagcggcugccgcuguaGUGCAUUGUAGUUGCAUUGcaugugucugaccagggugCAAUGCCCCUGCAGUGCAAUacagagccagcccccggc
((((..(.(((((.(.(((((.((((((((((..(((((((((.(.........).)))))))))..)))))))))).))))).).)))))).))))

Structure
    ca c     c g     G          UU         g guc 
gccg  g ggcug c cugua UGCAUUGUAG  GCAUUGcau u   u
||||  | ||||| | ||||| ||||||||||  ||||||||| |   g
cggc  c ccgac g gacaU ACGUGACGUC  CGUAACgug g   a
    -c -     c a     A          CC         g acc 


Annotation confidence Not enough data
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Genome context
2: 22514900-22514996 [+]

Database links

Mature oan-miR-33-5p

Accession MIMAT0006817
Description Ornithorhynchus anatinus oan-miR-33-5p mature miRNA
Sequence 22 - GUGCAUUGUAGUUGCAUUG - 40
Evidence experimental
Illumina [1]

Mature oan-miR-33a-3p

Accession MIMAT0006818
Description Ornithorhynchus anatinus oan-miR-33a-3p mature miRNA
Sequence 60 - CAAUGCCCCUGCAGUGCAAU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004