miRBase entry: oan-mir-1334

Stem-loop oan-mir-1334


Accession
MI0006680
Description
Ornithorhynchus anatinus oan-mir-1334 precursor miRNA


Sequence

12 reads, 1 reads per million, 2 experiments
cagcacaucugugagacugcugcggucccacccagaggaaaucacuuccacucuguguuuucaaauucaaUUAGGAAGUGAUUUCUUCAGGCuggaaagcaagucauccuggcug
((((.((...(.((((((..(((..(((..((..(((((((((((((((....((.(((....))).))....))))))))))))))).))..)))..))))))).)))))))))

Structure
    a  ucu u  -    gc   gg   ca  ca               acuc  u   u 
cagc ca   g ga gacu  ugc  ucc  cc  gaggaaaucacuucc    ug guu u
|||| ||   | || ||||  |||  |||  ||  |||||||||||||||    || |||  
gucg gu   c cu cuga  acg  agg  GG  CUUCUUUAGUGAAGG    ac uaa c
    -  --- -  a    --   aa   uC  -A               AUUa  u   a 


Annotation confidence Not enough data
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Genome context
3: 43390605-43390719 [-]

Database links

Mature oan-miR-1334

Accession MIMAT0006827
Description Ornithorhynchus anatinus oan-miR-1334 mature miRNA
Sequence 71 - UUAGGAAGUGAUUUCUUCAGGC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004