Stem-loop oan-mir-137a

Accession

MI0006687

Description

Ornithorhynchus anatinus oan-mir-137a precursor miRNA

Gene family

MIPF0000106; mir-137

Sequence

26886 reads, 798 reads per million, 4 experiments

gcuucgucuuucugacucucuucggugACGGGUAUUCUUGGGUGGAUAAUacggauuacguugUUAUUGCUUAAGAAUACGCGUAGucgaggagaguaucugcggcaggc
((((.(((......(((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..)))))))))))......)))))))

Structure

    c   uuucug           ug   G             G      -  g 
gcuu guc      acucucuucgg  ACG GUAUUCUUGGGUG AUAAUa cg a
|||| |||      |||||||||||  ||| ||||||||||||| |||||| || u
cgga cgg      ugagaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc u
    -   cgucua           GA   G             -      u  a 

Annotation confidence High

Genome context

4: 52507078-52507187 [-]

Mature oan-miR-137a-5p

• Accession: MIMAT0006837
• Description: Ornithorhynchus anatinus oan-miR-137a-5p mature miRNA
• Sequence: 28 - ACGGGUAUUCUUGGGUGGAUAAU - 50
• Evidence: experimental ; Illumina [1]

Mature oan-miR-137a-3p

• Accession: MIMAT0006838
• Description: Ornithorhynchus anatinus oan-miR-137a-3p mature miRNA
• Sequence: 64 - UUAUUGCUUAAGAAUACGCGUAG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004