Stem-loop oan-mir-190a

Accession

MI0006690

Description

Ornithorhynchus anatinus oan-mir-190a precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

7301 reads, 153 reads per million, 5 experiments

aggccucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAACAUAUUCCUacagugucu
((((..(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).))))

Structure

    cu     -U                UA     uuau 
aggc  cugug  GAUAUGUUUGAUAUAU  GGUug    u
||||  |||||  ||||||||||||||||  |||||     
ucug  gacaU  UUAUACAAACUAUAUA  UCAac    u
    -u     CC                --     cuaa 

Annotation confidence High

Genome context

5: 18141101-18141178 [+]

Mature oan-miR-190a-5p

• Accession: MIMAT0006843
• Description: Ornithorhynchus anatinus oan-miR-190a-5p mature miRNA
• Sequence: 12 - UGAUAUGUUUGAUAUAUUAGGU - 33
• Evidence: experimental ; Illumina [1]

Mature oan-miR-190a-3p

• Accession: MIMAT0006844
• Description: Ornithorhynchus anatinus oan-miR-190a-3p mature miRNA
• Sequence: 48 - ACUAUAUAUCAAACAUAUUCCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004