miRBase entry: oan-mir-363

Stem-loop oan-mir-363


Accession
MI0006698
Description
Ornithorhynchus anatinus oan-mir-363 precursor miRNA
Gene family
MIPF0000138; mir-363


Sequence

30911 reads, 811 reads per million, 5 experiments
guuuugcuguuguCGGGUGGAUCACGAUGCAAUUUugauuaguuuaguaggagaaaAAUUGCACGGUAUCCAUCUGUaaaccgcaggac
(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).)))))))

Structure
       u   gu         CA  A         --ga   gu 
guuuugc guu  CGGGUGGAU  CG UGCAAUUUu    uua  u
||||||| |||  |||||||||  || |||||||||    |||   
caggacg caa  GUCUACCUA  GC ACGUUAAaa    gau  u
       c   aU         UG  -         agag   ga 


Annotation confidence High
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Genome context
6: 8561848-8561936 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from oan-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-363-5p

Accession MIMAT0006859
Description Ornithorhynchus anatinus oan-miR-363-5p mature miRNA
Sequence 14 - CGGGUGGAUCACGAUGCAAUUU - 35
Evidence experimental
Illumina [1]

Mature oan-miR-363-3p

Accession MIMAT0006860
Description Ornithorhynchus anatinus oan-miR-363-3p mature miRNA
Sequence 57 - AAUUGCACGGUAUCCAUCUGU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004