miRBase entry: oan-mir-205

Stem-loop oan-mir-205


Accession
MI0006703
Description
Ornithorhynchus anatinus oan-mir-205 precursor miRNA
Gene family
MIPF0000058; mir-205


Sequence

26 reads, 1 reads per million, 4 experiments
gaauucggaacgauccauggguuucuguugUCCUUCAUUCCACCGGAGUCUguuucguaccuaaucaGAUUUCAGUGGAGUGAAGCACAagaggcauggaguugaauc
..........(((((((((....(((.((((.(((((((((((.((((((((.............)))))))).))))))))))).)))).))))))))).)))....

Structure
gaauucggaa   -      gguu   g    C           C        uuucg 
          cga uccaug    ucu uugU CUUCAUUCCAC GGAGUCUg     u
          ||| ||||||    ||| |||| ||||||||||| ||||||||     a
          guu agguac    gga aACA GAAGUGAGGUG CUUUAGac     c
------cuaa   g      ----   g    C           A        uaauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
7: 39687501-39687608 [+]

Database links

Mature oan-miR-205-5p

Accession MIMAT0006866
Description Ornithorhynchus anatinus oan-miR-205-5p mature miRNA
Sequence 31 - UCCUUCAUUCCACCGGAGUCU - 51
Evidence experimental
Illumina [1]

Mature oan-miR-205-3p

Accession MIMAT0006867
Description Ornithorhynchus anatinus oan-miR-205-3p mature miRNA
Sequence 68 - GAUUUCAGUGGAGUGAAGCACA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004