miRBase entry: oan-mir-451

Stem-loop oan-mir-451


Accession
MI0006722
Description
Ornithorhynchus anatinus oan-mir-451 precursor miRNA
Gene family
MIPF0000148; mir-451


Sequence

876122 reads, 16586 reads per million, 5 experiments
acggcaccgagggucuggcgaggAAACCGUUACCAUUACUGAGUUUaguaaugguaacgguucucuggcugggcccaccagcugu
(((((.....(((((((((.(((.((((((((((((((((......)))))))))))))))).))).)))))))))....)))))

Structure
     accga         g   A                GA 
acggc     gggucuggc agg AACCGUUACCAUUACU  G
|||||     ||||||||| ||| ||||||||||||||||   
ugucg     cccgggucg ucu uuggcaaugguaauga  U
     -acca         g   c                UU 


Annotation confidence Not enough data
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Genome context
Contig127412: 50-134 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-451
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-451

Accession MIMAT0006901
Description Ornithorhynchus anatinus oan-miR-451 mature miRNA
Sequence 24 - AAACCGUUACCAUUACUGAGUUU - 46
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004