miRBase entry: oan-mir-1344

Stem-loop oan-mir-1344


Accession
MI0006725
Description
Ornithorhynchus anatinus oan-mir-1344 precursor miRNA


Sequence

270 reads, 482 reads per million, 1 experiments
caccUGAUGCUGGGAAAUGUAGUUCUGGgcugggaaaugaagaaauaaauccccaccggcggcugucccuccccgcacggaucccgug
...(((.(((.((((....(((((((((...((((.((......))...))))..)))).)))))....)))).))))))........

Structure
-----cac   A   U    AAUG     -    gcu    --a  ga 
        cUG UGC GGGA    UAGUU CUGG   ggga   au  a
        ||| ||| ||||    ||||| ||||   ||||   ||   
        ggc acg cccu    gucgg ggcc   cccu   ua  g
gugcccua   -   c    cccu     c    -ac    aaa  aa 


Annotation confidence Not enough data
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Genome context
Contig14358: 22447-22534 [-]

Database links

Mature oan-miR-1344

Accession MIMAT0006906
Description Ornithorhynchus anatinus oan-miR-1344 mature miRNA
Sequence 5 - UGAUGCUGGGAAAUGUAGUUCUGG - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004