Accession
MI0006738
Description
Ornithorhynchus anatinus
oan-mir-1420d precursor miRNA
Gene family
MIPF0000574;
mir-1420
Sequence
31
reads,
41
reads per million, 2 experiments
uuauacugcuagugauuauucaacucugccuAUCUGGCCUGGUUGCACUCUCUgaggauauaaaaaucagAAAUUGCUACCAGGUUGGAUGUgcuugguugggucuuggcuucuaa
.......(((((.(((...((((((..((.(((((((((((((.(((...(((((...........)))))...))).))))))))))))).))..))))))))))))))......
.......(((((.(((...((((((..((.(((((((((((((.(((...(((((...........)))))...))).))))))))))))).))..))))))))))))))......
Structure
uuauacu u uau cu c U CUC ggau
gcuag gau ucaacu gc uAUCUGGCCUGGU GCA UCUga a
||||| ||| |||||| || ||||||||||||| ||| ||||| u
cgguu cug gguugg cg GUAGGUUGGACCA CGU Agacu a
-aaucuu - --- uu U U UAA aaaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Contig1754: 88499-88614 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from oan-mir-1420d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature oan-miR-1420d-5p
| Accession | MIMAT0006927 |
| Description | Ornithorhynchus anatinus oan-miR-1420d-5p mature miRNA |
| Sequence | 32 - AUCUGGCCUGGUUGCACUCUCU - 53 |
| Evidence |
experimental
Illumina [1] |
Mature oan-miR-1420d-3p
| Accession | MIMAT0006928 |
| Description | Ornithorhynchus anatinus oan-miR-1420d-3p mature miRNA |
| Sequence | 71 - AAAUUGCUACCAGGUUGGAUGU - 92 |
| Evidence |
experimental
Illumina [1] |
References
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