Accession
MI0006739
Description
Ornithorhynchus anatinus
oan-mir-1420e precursor miRNA
Gene family
MIPF0000574;
mir-1420
Sequence
36
reads,
40
reads per million, 3 experiments
cugaacucguucuucgcccagcuaugucuGUCUGACCCAGCUGUACUCUCUggacauaaaaagcagAAAGUGCGACUGGAUCGGAUCGguaugguugggaugaucacggcaugg
......((((...(((((((((((((.((((((((.((((.((((((.((((...........)))).)))))).)))).))))).))))))))))))).)))..)))).....
......((((...(((((((((((((.((((((((.((((.((((((.((((...........)))).)))))).)))).))))).))))))))))))).)))..)))).....
Structure
cugaac ucu - u - C C C gaca
ucgu ucg cccagcuaug cuG UCUGA CCAG UGUACU UCUg u
|||| ||| |||||||||| ||| ||||| |||| |||||| |||| a
ggca agu ggguugguau gGC AGGCU GGUC GCGUGA Agac a
-gguac -cu a - U A A A gaaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Contig1754: 88652-88765 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from oan-mir-1420e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature oan-miR-1420e-3p
| Accession | MIMAT0006929 |
| Description | Ornithorhynchus anatinus oan-miR-1420e-3p mature miRNA |
| Sequence | 67 - AAAGUGCGACUGGAUCGGAUCG - 88 |
| Evidence |
experimental
Illumina [1-2] |
Mature oan-miR-1420e-5p
| Accession | MIMAT0026755 |
| Description | Ornithorhynchus anatinus oan-miR-1420e-5p mature miRNA |
| Sequence | 30 - GUCUGACCCAGCUGUACUCUCU - 51 |
| Evidence |
experimental
Illumina [2] |
References
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