miRBase entry: oan-mir-1422l

Stem-loop oan-mir-1422l


Accession
MI0006746
Description
Ornithorhynchus anatinus oan-mir-1422l precursor miRNA
Gene family
MIPF0000565; mir-1422


Sequence

159 reads, 272 reads per million, 2 experiments
gugaacaucgaggcucgggUUUCAUUCAAGCCGUCUUUUCUuccuauugguaauaagaaaauucugacuugauugauucccgagucagaugauauacac
(((..((((..((((((((..(((.((((((.(..(((((((((....))....)))))))..).).))))).)))..)))))))).))))...)))..

Structure
--   -aa    ga        UU   U     - C UC       ----  u 
  gug   cauc  ggcucggg  UCA UCAAG C G  UUUUCUu    cc a
  |||   ||||  ||||||||  ||| ||||| | |  |||||||    ||  
  cau   guag  cugagccc  agu aguuc g c  aaaagaa    gg u
ca   aua    -a        uu   u     a u uu       uaau  u 


Annotation confidence High
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Genome context
Contig191065: 99-197 [-]

Database links

Mature oan-miR-1422l

Accession MIMAT0006939
Description Ornithorhynchus anatinus oan-miR-1422l mature miRNA
Sequence 20 - UUUCAUUCAAGCCGUCUUUUCU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004