Stem-loop oan-mir-1353

Accession

MI0006752

Description

Ornithorhynchus anatinus oan-mir-1353 precursor miRNA

Sequence

ugguccuggcucuggggagaugcgggggccucuuuguggacuaagggcugagagaagacuauugcucaaccCCAGCCCGUUUUCCAGAGGUCUcccuuucuccagcgccucaccg
.(((...(((.(((((((((.(.((((((((((....(((....((((((.(.(..(((....).))..).)))))))....))))))))))))))))))))))).)))..))).

Structure

u   ccu   u         u c          uugu   cuaa      a a aa  - u 
 ggu   ggc cuggggaga g gggggccucu    gga    gggcug g g  ga c a
 |||   ||| ||||||||| | ||||||||||    |||    |||||| | |  || |  
 cca   ccg gaccucuuu c ccUCUGGAGA    CCU    CCCGAC C c  cu g u
g   -cu   c         - -          ----   UUUG      - c aa  c u 

Annotation confidence Not enough data

Genome context

Contig2045: 70463-70577 [+]

Mature oan-miR-1353

• Accession: MIMAT0006946
• Description: Ornithorhynchus anatinus oan-miR-1353 mature miRNA
• Sequence: 72 - CCAGCCCGUUUUCCAGAGGUCU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004