miRBase entry: oan-mir-1355

Stem-loop oan-mir-1355


Accession
MI0006755
Description
Ornithorhynchus anatinus oan-mir-1355 precursor miRNA


Sequence

130 reads, 3 reads per million, 4 experiments
gggaggcccuggcUGUUCCAGUUUUGAGAGGAGUguguguuggcaaacUCUCCUCUCGAUCCUGGCACUaccugugccaucacc
(((((((.(.((..((.((((..((((((((((.((.((....)).)).))))))))))..)))).))..)).).))).)).))

Structure
  -  -   c u  cU  U    UU          U  g  u 
gg ga ggc c gg  GU CCAG  UUGAGAGGAG gu ug u
|| || ||| | ||  || ||||  |||||||||| || ||  
cc cu ccg g cc  CA GGUC  AGCUCUCCUC ca ac g
  a  a   u u  aU  C    CU          U  a  g 


Annotation confidence High
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Genome context
Contig21612: 5369-5452 [+]

Database links

Mature oan-miR-1355-5p

Accession MIMAT0006951
Description Ornithorhynchus anatinus oan-miR-1355-5p mature miRNA
Sequence 14 - UGUUCCAGUUUUGAGAGGAGU - 34
Evidence experimental
Illumina [1]

Mature oan-miR-1355-3p

Accession MIMAT0006952
Description Ornithorhynchus anatinus oan-miR-1355-3p mature miRNA
Sequence 49 - UCUCCUCUCGAUCCUGGCACU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004