miRBase entry: oan-mir-147

Stem-loop oan-mir-147


Accession
MI0006785
Description
Ornithorhynchus anatinus oan-mir-147 precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

12 reads, 1 reads per million, 5 experiments
ccccccgucccccugggaauccagcggaaucaccucugcacaaacucgucuucugaaccaGUGUGCGGAGAUGCUUCCGccgcauucucagggucuccccacguccgggg
..........((((((((((.(.((((((.((.(((((((((......((....)).....))))))))).)).)))))).).))))))))))...((((......))))

Structure
-------ccccccgucc          c a      u  c         aacucg  u 
                 cccugggaau c gcggaa ca cucugcaca      uc u
                 |||||||||| | |||||| || |||||||||      ||  
                 gggacucuua g cGCCUU GU GAGGCGUGU      ag c
ggggccugcaccccucu          c c      C  A         -Gacca  u 


Annotation confidence Not enough data
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Genome context
Contig27343: 1681-1790 [-]

Database links

Mature oan-miR-147

Accession MIMAT0007003
Description Ornithorhynchus anatinus oan-miR-147 mature miRNA
Sequence 61 - GUGUGCGGAGAUGCUUCCG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004