Stem-loop oan-mir-1367

Accession

MI0006803

Description

Ornithorhynchus anatinus oan-mir-1367 precursor miRNA

Sequence

4 reads, 2 reads per million, 3 experiments

uacaacggguggaguauuccgagcuaacaauaguuuuAUGGUAGAGGUCGAGUCCGuuuuucugacauaacauagcgagguuugggugUUGCGGAAGAAACCAGACUUUUacuucuuggcugagcuauuuguugug
(((((((((((((....))).((((.....(((((....((((((((((..((...((((((((...((((((..(((...))).))))))))))))))))..))))))))))....)))))))))))))))))))

Structure

          ggaguauuccg    aacaa     uuAU          GA  CCG        aca      ag   g 
uacaacgggu           agcu     uaguu    GGUAGAGGUC  GU   uuuuucug   uaacau  cga  
||||||||||           ||||     |||||    ||||||||||  ||   ||||||||   ||||||  ||| g
guguuguuua           ucga     gucgg    ucaUUUUCAG  CA   AAGAAGGC   GUUgug  guu  
          -----------    -----     uucu          AC  ---        ---      -g   u 

Annotation confidence Not enough data

Genome context

Contig41309: 4778-4913 [-]

Mature oan-miR-1367-5p

• Accession: MIMAT0007031
• Description: Ornithorhynchus anatinus oan-miR-1367-5p mature miRNA
• Sequence: 38 - AUGGUAGAGGUCGAGUCCG - 56
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1367-3p

• Accession: MIMAT0007032
• Description: Ornithorhynchus anatinus oan-miR-1367-3p mature miRNA
• Sequence: 89 - UUGCGGAAGAAACCAGACUUUU - 110
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004