miRBase entry: oan-mir-1370

Stem-loop oan-mir-1370


Accession
MI0006806
Description
Ornithorhynchus anatinus oan-mir-1370 precursor miRNA


Sequence

10 reads, 2 reads per million, 4 experiments
uguugauuuuuauuuuggaagguaagaaucaccagaauucaguuuauguugaauugaauagaguguuGACCGAGGAUGAAAAUCAua
...((((((((((((.....(((......(((....((((((((((...))))))))))...)))...)))..))))))))))))..

Structure
ugu            uggaa   aagaau   caga          u 
   ugauuuuuauuu     ggu      cac    auucaguuua  
   ||||||||||||     |||      |||    |||||||||| g
   ACUAAAAGUAGG     CCA      gug    uaaguuaagu  
-au            ---AG   ---Guu   -aga          u 


Annotation confidence Not enough data
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Genome context
Contig44612: 1559-1645 [+]

Database links

Mature oan-miR-1370

Accession MIMAT0007035
Description Ornithorhynchus anatinus oan-miR-1370 mature miRNA
Sequence 68 - GACCGAGGAUGAAAAUCA - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004