miRBase entry: oan-mir-1374

Stem-loop oan-mir-1374


Accession
MI0006821
Description
Ornithorhynchus anatinus oan-mir-1374 precursor miRNA


Sequence

22 reads, 1 reads per million, 3 experiments
aggugccugaguggucagccUGUUUCCUGGGGCUUCCCUGUugcugcuuccaguuugggucaccaugggaguuccagggaucgugcugccccccuggguccu
(((.(((((.(.((.((((.((.((((((((((((((.....((((....)))).(((....))).)))))))))))))).)).)))).)).).))))))))

Structure
   u     a u  u    c  U              -------CUGUu    c 
agg gccug g gg cagc UG UUCCUGGGGCUUCC            gcug u
||| ||||| | || |||| || ||||||||||||||            ||||  
ucc ugggu c cc gucg gc agggaccuugaggg            ugac u
   -     c c  c    u  u              uaccacuggguu    c 


Annotation confidence Not enough data
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Genome context
Contig59: 2576303-2576404 [+]

Database links

Mature oan-miR-1374

Accession MIMAT0007055
Description Ornithorhynchus anatinus oan-miR-1374 mature miRNA
Sequence 21 - UGUUUCCUGGGGCUUCCCUGU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004