Stem-loop sequence oan-mir-1419a

Accession MI0006829
Description Ornithorhynchus anatinus miR-1419a stem-loop
Gene family MIPF0000570; mir-1419
Stem-loop 
--- ag      ugu  c  a a    c   a    gc      -u  ua 
   g  ugaugg   ca gc c gugc ggg ggug  aucagg  gc  a
   |  ||||||   || || | |||| ||| ||||  ||||||  ||   
   c  acuacc   gu cg g uacg ccc cuac  uagucc  ug  c
cca ga      --u  a  c c    a   a    ua      uu  cu
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Genome context
Coordinates (OANA5) Overlapping transcripts
Contig7160: 5129-5224 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-1419a
oan-mir-1421i-3 Contig7160: 14496-14562 [-]
oan-mir-1421r Contig7160: 13915-14033 [-]
oan-mir-1421q Contig7160: 13103-13216 [-]
oan-mir-1421p-1 Contig7160: 12428-12492 [-]
oan-mir-1421i-2 Contig7160: 11366-11432 [-]
oan-mir-1421o Contig7160: 10811-10906 [-]
oan-mir-1421g-3 Contig7160: 10086-10153 [-]
oan-mir-1421k-2 Contig7160: 9501-9619 [-]
oan-mir-1421l-2 Contig7160: 8702-8788 [-]
oan-mir-1421n-1 Contig7160: 7381-7494 [-]
oan-mir-1421m Contig7160: 5522-5642 [-]
oan-mir-1419a Contig7160: 5129-5224 [-]
oan-mir-1421g-2 Contig7160: 3551-3650 [-]
oan-mir-1421k-3 Contig7160: 2982-3100 [-]
oan-mir-1421l-1 Contig7160: 1639-1731 [-]
oan-mir-1421k-1 Contig7160: 751-869 [-]
Database links

Mature sequence oan-miR-1419a-5p

Accession MIMAT0007070
Previous IDs oan-miR-1419a*
Sequence

20 -  

agugccgggagguggcaucagg

 - 41

Get sequence
Evidence experimental; Solexa [1]

Mature sequence oan-miR-1419a-3p

Accession MIMAT0007071
Previous IDs oan-miR-1419a
Sequence

57 -  

ugauaucaucacccagcaucgc

 - 78

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).