miRBase entry: oan-mir-196b

Stem-loop oan-mir-196b


Accession
MI0006869
Description
Ornithorhynchus anatinus oan-mir-196b precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

21187 reads, 625 reads per million, 4 experiments
aacuggucugugauuUAGGUAGUUUCCUGUUGUUGGggcuccaccuuucucuCGACAGCACGACACUGCCUUCAuuacuucaguu
((((((...(((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..))))).))))))

Structure
      ucu     uU       U  C           cucc 
aacugg   gugau  AGGUAGU UC UGUUGUUGGgg    a
||||||   |||||  ||||||| || |||||||||||    c
uugacu   cauuA  UCCGUCA AG ACGACAGCucu    c
      --u     CU       C  C           cuuu 


Annotation confidence Not enough data
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Genome context
Ultra231: 2305902-2305986 [-]

Database links

Mature oan-miR-196b-5p

Accession MIMAT0007139
Description Ornithorhynchus anatinus oan-miR-196b-5p mature miRNA
Sequence 16 - UAGGUAGUUUCCUGUUGUUGG - 36
Evidence experimental
Illumina [1]

Mature oan-miR-196b-3p

Accession MIMAT0007140
Description Ornithorhynchus anatinus oan-miR-196b-3p mature miRNA
Sequence 53 - CGACAGCACGACACUGCCUUCA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004