miRBase entry: oan-mir-802

Stem-loop oan-mir-802


Accession
MI0006896
Description
Ornithorhynchus anatinus oan-mir-802 precursor miRNA
Gene family
MIPF0000353; mir-802


Sequence

37 reads, 4 reads per million, 2 experiments
guuucuguuucuugcagUCAGUAACAAAGAUUCAUCCUUGUguccuguaagcaacAGGGAGGGUCUUUGUCACUGAgugcaauuaaugguggc
(((.(((((..(((((.(((((.((((((((((.(((((((((.......)).))))))))))))))))).))))).)))))..))))).)))

Structure
   u     uc     g     A          A       -  cc 
guu cuguu  uugca UCAGU ACAAAGAUUC UCCUUGU gu  u
||| |||||  ||||| ||||| |||||||||| ||||||| ||  g
cgg gguaa  aacgu AGUCA UGUUUCUGGG AGGGAca cg  u
   u     uu     g     C          -       a  aa 


Annotation confidence Not enough data
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Genome context
Ultra41: 436687-436779 [-]

Database links

Mature oan-miR-802-5p

Accession MIMAT0007181
Description Ornithorhynchus anatinus oan-miR-802-5p mature miRNA
Sequence 18 - UCAGUAACAAAGAUUCAUCCUUGU - 41
Evidence experimental
Illumina [1]

Mature oan-miR-802-3p

Accession MIMAT0007182
Description Ornithorhynchus anatinus oan-miR-802-3p mature miRNA
Sequence 56 - AGGGAGGGUCUUUGUCACUGA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004