miRBase entry: oan-mir-1393

Stem-loop oan-mir-1393


Accession
MI0006901
Description
Ornithorhynchus anatinus oan-mir-1393 precursor miRNA


Sequence

3 reads, 0 reads per million, 2 experiments
ggguugugaugguguggauggaggggggagcaguagcagcagagaaaggugacggcuuugccaucgcgUCACCUUCCCUGCAGCCACUgcuccucccugccgugcugcugcucgaccc
((((((.(.(((((.(.(((((((((((((((((.((.((((.(.(((((((((............))))))))).))))).)).))))))))))))).)))).))))))).))))))

Structure
      u a     u g    -             a  a    a a         gcuuu 
ggguug g uggug g augg aggggggagcagu gc gcag g aaggugacg     g
|||||| | ||||| | |||| ||||||||||||| || |||| | |||||||||      
cccagc c gucgu c ugcc ucccuccucgUCA CG CGUC C UUCCACUgc     c
      u -     - g    g             C  A    - C         gcuac 


Annotation confidence Not enough data
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Genome context
Ultra443: 2716486-2716603 [-]

Database links

Mature oan-miR-1393

Accession MIMAT0007191
Description Ornithorhynchus anatinus oan-miR-1393 mature miRNA
Sequence 69 - UCACCUUCCCUGCAGCCACU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004