Stem-loop oan-mir-10b

Accession

MI0006921

Description

Ornithorhynchus anatinus oan-mir-10b precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

539635 reads, 11859 reads per million, 5 experiments

gaauauuauuacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauucacauagucacAGAUUCGAUUCUAGGGGAAUauauggucgaugcaaaaacuuc
...........(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))..........

Structure

gaauauuauua     u        A    G     C          u g   u 
           cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
           ||||| |||||||| |||| ||||| |||||||||| | |||  
           guagc gguauaUA GGGG AUCUU GCUUAGAcac u aua a
-cuucaaaaac     u        A    -     A          - g   c 

Annotation confidence Not enough data

Genome context

Ultra514: 14702275-14702381 [+]

Mature oan-miR-10b-5p

• Accession: MIMAT0007218
• Description: Ornithorhynchus anatinus oan-miR-10b-5p mature miRNA
• Sequence: 25 - UACCCUGUAGAACCGAAUUUGU - 46
• Evidence: experimental ; Illumina [1]

Mature oan-miR-10b-3p

• Accession: MIMAT0007219
• Description: Ornithorhynchus anatinus oan-miR-10b-3p mature miRNA
• Sequence: 66 - AGAUUCGAUUCUAGGGGAAU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004