Stem-loop oan-mir-7-1

Accession

MI0006926

Description

Ornithorhynchus anatinus oan-mir-7-1 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

15392 reads, 447 reads per million, 5 experiments

gccuguagaauauauagaagauuucaguggacguuggucuaguucugugUGGAAGACUAGUGAUUUUGUUGUuuguagauaacuaaaucgaCAACAAAUCGCAGUCUGCCAUAuggcacagaccaugccucuacaggac
.((((((((.......(((...)))...((.(((.(((((.((.((((((((.(((((.(((((((.((((((..(((....)))....)))))))))))))))))).)))))))).))))))))))))))))))))..

Structure

-g        auauauagaagauuucagu  a   u     a  u        A     A       U      --ug   a 
  ccuguaga                   gg cgu ggucu gu cugugUGG AGACU GUGAUUU GUUGUu    uag u
  ||||||||                   || ||| ||||| || |||||||| ||||| ||||||| ||||||    |||  
  ggacaucu                   cc gua ccaga ca gguAUACC UCUGA CGCUAAA CAACag    auc a
ca        -------------------  -   -     -  c        G     -       -      cuaa   a 

Annotation confidence Not enough data

Genome context

Ultra666: 6521-6659 [-]

Mature oan-miR-7-5p

• Accession: MIMAT0006986
• Description: Ornithorhynchus anatinus oan-miR-7-5p mature miRNA
• Sequence: 50 - UGGAAGACUAGUGAUUUUGUUGU - 72
• Evidence: experimental ; Illumina [1]

Mature oan-miR-7-1-3p

• Accession: MIMAT0009195
• Description: Ornithorhynchus anatinus oan-miR-7-1-3p mature miRNA
• Sequence: 92 - CAACAAAUCGCAGUCUGCCAUA - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004