miRBase entry: oan-mir-1421aa

Stem-loop oan-mir-1421aa


Accession
MI0006942
Description
Ornithorhynchus anatinus oan-mir-1421aa precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

191 reads, 139 reads per million, 4 experiments
gaccuacggcauggugugAACAGGUCAUGUGUGAUGCAGUgugauagugaaauaugcUGCAUCGCGUGUGACCUCCCUACacagcacuguguc
.......((((((((((....((((((((((((((((((((((.........)))))))))))))))))))))).........))))))))))

Structure
gaccuac          -----gAAC                      aua 
       ggcauggugu         AGGUCAUGUGUGAUGCAGUgug   g
       ||||||||||         ||||||||||||||||||||||   u
       cugugucacg         UCCAGUGUGCGCUACGUcguau   g
-------          acaCAUCCC                      aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
X1: 44291691-44291783 [-]
Clustered miRNAs
15 other miRNAs are < 10 kb from oan-mir-1421aa
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421aa-5p

Accession MIMAT0007249
Description Ornithorhynchus anatinus oan-miR-1421aa-5p mature miRNA
Sequence 19 - AACAGGUCAUGUGUGAUGCAGU - 40
Evidence experimental
Illumina [1]

Mature oan-miR-1421aa-3p

Accession MIMAT0007250
Description Ornithorhynchus anatinus oan-miR-1421aa-3p mature miRNA
Sequence 58 - UGCAUCGCGUGUGACCUCCCUAC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004