Stem-loop sequence oan-mir-1421ab-1

Accession MI0006943
Description Ornithorhynchus anatinus miR-1421ab-1 stem-loop
Gene family MIPF0000564; mir-1421
Stem-loop 
            c    c     ga  gaug 
gugaggagcuca acgu uugca  gu    u
|||||||||||| |||| |||||  ||    c
cauuccucgagu ugcg aacgu  ua    a
            c    u     ag  aaau
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Genome context
Coordinates (OANA5) Overlapping transcripts
X1: 44298540-44298604 [-]
antisense
ENSOANT00000030955 ; F6S1K5_ORNAN; intron 2
Clustered miRNAs
< 10kb from oan-mir-1421ab-1
oan-mir-1421ac-2 X1: 44308437-44308523 [-]
oan-mir-1414 X1: 44306726-44306812 [-]
oan-mir-1419c-3 X1: 44304901-44305008 [-]
oan-mir-1421ag-2 X1: 44303617-44303684 [-]
oan-mir-1421y-3 X1: 44303056-44303140 [-]
oan-mir-1421ai X1: 44301501-44301574 [-]
oan-mir-1421ab-1 X1: 44298540-44298604 [-]
oan-mir-1419d X1: 44298117-44298229 [-]
oan-mir-1419c-2 X1: 44296776-44296886 [-]
oan-mir-1421ag-1 X1: 44295490-44295574 [-]
oan-mir-1421y-2 X1: 44294920-44295029 [-]
oan-mir-1421ab-2 X1: 44293810-44293911 [-]
oan-mir-1421aa X1: 44291691-44291783 [-]
oan-mir-1419c-1 X1: 44291006-44291114 [-]
oan-mir-1421z X1: 44289986-44290072 [-]
Database links

Mature sequence oan-miR-1421ab-5p

Accession MIMAT0007251
Previous IDs oan-miR-1421ab
Sequence

4 -  

aggagcucacacgucuugcaga

 - 25

Get sequence
Evidence experimental; Solexa [1]

Mature sequence oan-miR-1421ab-3p

Accession MIMAT0007252
Previous IDs oan-miR-1421ab*
Sequence

43 -  

ugcaaugcgucugagcuccuu

 - 63

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).