Stem-loop sequence oan-mir-1421ad

Accession MI0006947
Description Ornithorhynchus anatinus miR-1421ad stem-loop
Gene family MIPF0000564; mir-1421
Stem-loop 
     augga   --aac       u  c           aua 
acggc     gug     agguuau cg ggugcagugug   g
|||||     |||     ||||||| || |||||||||||   u
ugucg     cac     uccaaug gc cuacgucauau   g
     -gaag   auccc       u  a           aag
Get sequence
Genome context
Coordinates (OANA5) Overlapping transcripts
X1: 44314924-44315009 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-1421ad
oan-mir-1421ah X1: 44321166-44321259 [-]
oan-mir-1421af X1: 44318896-44318990 [-]
oan-mir-1419e X1: 44317624-44317710 [-]
oan-mir-1421ae X1: 44316162-44316264 [-]
oan-mir-1421ad X1: 44314924-44315009 [-]
oan-mir-1421aj X1: 44314342-44314472 [-]
oan-mir-1421ac-1 X1: 44311290-44311413 [-]
oan-mir-1421ac-2 X1: 44308437-44308523 [-]
oan-mir-1414 X1: 44306726-44306812 [-]
Database links

Mature sequence oan-miR-1421ad-5p

Accession MIMAT0007259
Previous IDs oan-miR-1421ad
Sequence

14 -  

aacagguuauucgcggugcagu

 - 35

Get sequence
Evidence experimental; Solexa [1]

Mature sequence oan-miR-1421ad-3p

Accession MIMAT0007260
Previous IDs oan-miR-1421ad*
Sequence

53 -  

ugcaucacguguaaccucccua

 - 74

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).