miRBase entry: oan-mir-187

Stem-loop oan-mir-187


Accession
MI0006951
Description
Ornithorhynchus anatinus oan-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187


Sequence

6922 reads, 84 reads per million, 5 experiments
ugugagaccuccgGCUACAACAGAGGACACAGGAgcuuuucagaacccUCGUGUCUUGUGUUGCAGCCAgaggagcaca
((((...((((.((((.(((((.((((((((((.............))).))))))).))))).)))).))))..))))

Structure
    aga    c    A     G       -   Agcuu 
ugug   ccuc gGCU CAACA AGGACAC AGG     u
||||   |||| |||| ||||| ||||||| |||     u
acac   ggag CCGA GUUGU UUCUGUG Ucc     c
    -ga    A    C     G       C   caaga 


Annotation confidence Not enough data
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Genome context
X3: 5316985-5317063 [+]

Database links

Mature oan-miR-187-5p

Accession MIMAT0007266
Description Ornithorhynchus anatinus oan-miR-187-5p mature miRNA
Sequence 14 - GCUACAACAGAGGACACAGGA - 34
Evidence experimental
Illumina [1]

Mature oan-miR-187-3p

Accession MIMAT0007267
Description Ornithorhynchus anatinus oan-miR-187-3p mature miRNA
Sequence 49 - UCGUGUCUUGUGUUGCAGCCA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004