miRBase entry: oan-mir-1416

Stem-loop oan-mir-1416


Accession
MI0006954
Description
Ornithorhynchus anatinus oan-mir-1416 precursor miRNA
Gene family
MIPF0000692; mir-1426


Sequence

cugggcaaguaaccaauggcugucacucuuUCCUUAACUCAUGCCGCUGUGCauucucuucuuucgcaacaggguggguugaguacaaagugccggucuaauccag
.(((........)))..(((((.((((.....((((((((..(((.((((((.............)).))))))))))))))).....)))).)))))........

Structure
cugggcaaguaaccaau     u    cuuUC        AU   G    -  auucu 
                 ggcug cacu     CUUAACUC  GCC CUGU GC     c
                 ||||| ||||     ||||||||  ||| |||| ||     u
                 cuggc guga     gaguuggg  ugg gaca cg     u
---------gaccuaau     c    aacau        --   -    a  cuuuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
X5: 796048-796153 [-]

Database links

Mature oan-miR-1416

Accession MIMAT0007271
Description Ornithorhynchus anatinus oan-miR-1416 mature miRNA
Sequence 31 - UCCUUAACUCAUGCCGCUGUGC - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004