Accession
MI0006962
Description
Ornithorhynchus anatinus
oan-let-7f-1 precursor miRNA
Gene family
MIPF0000002;
let-7
Sequence
2345924
reads,
46111
reads per million, 5 experiments
uuugcuaaggauggauugcucuggcagagUGAGGUAGUAGAUUGUAUAGUUuuuaggguaguaauuuuauccuuuuccggagauaaCUAUACAAUCUAUUGCCUUCccugaggagcagaauuucuacggugguuucuauccggguuuga
...(((..((((((((((((((..(((.(.(((((((((((((((((((((.(((((((((.....)))))))........)).))))))))))))))))))))).)))).)))))))................))))))).)))....
...(((..((((((((((((((..(((.(.(((((((((((((((((((((.(((((((((.....)))))))........)).))))))))))))))))))))).)))).)))))))................))))))).)))....
Structure
-uuu aa ---------------- gg a U u -------- u
gcu ggaugga uugcucu cag g GAGGUAGUAGAUUGUAUAGUU uu aggguag a
||| ||||||| ||||||| ||| | ||||||||||||||||||||| || ||||||| a
ugg ccuaucu gacgagg guc c UUCCGUUAUCUAACAUAUCaa ag uccuauu u
aguu -g uugguggcaucuuuaa -a - C u aggccuuu u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
X1: 34978329-34978477 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-let-7f-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature oan-let-7f-5p
| Accession | MIMAT0007179 |
| Description | Ornithorhynchus anatinus oan-let-7f-5p mature miRNA |
| Sequence | 30 - UGAGGUAGUAGAUUGUAUAGUU - 51 |
| Evidence |
experimental
Illumina [1] |
| Database links |
|
Mature oan-let-7f-1-3p
| Accession | MIMAT0007180 |
| Description | Ornithorhynchus anatinus oan-let-7f-1-3p mature miRNA |
| Sequence | 87 - CUAUACAAUCUAUUGCCUUC - 106 |
| Evidence |
experimental
Illumina [1] |
References
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