Accession
MI0006984
Description
Gallus gallus
gga-mir-454 precursor miRNA mir-454
Gene
family?
family?
RF00746;
mir-454
Literature search
4 open access papers mention gga-mir-454
(9 sentences)
(9 sentences)
Sequence
4112
reads,
50
reads per million, 5 experiments
ccauuauccagcuUCCUAACCUUAAGGAUGAGacccuaucaauauugccucugcuuuugugcucaggguagUAGUGCAAUAUUGCUUAUAGGGUcuuuucuuuugaggguauucuucaugg
.......(((.........(((((((((.((((((((((((((((((((((((((((.(....)))))))).)).)))))))))...)))))))))).)).)))))))..........)))
.......(((.........(((((((((.((((((((((((((((((((((((((((.(....)))))))).)).)))))))))...)))))))))).)).)))))))..........)))
Structure
ccauuau -gcuUCCUAA - U --- - - u u
cca CCUUAAG GA GAGacccuau caauauugc cu cugcuuu g g
||| ||||||| || |||||||||| ||||||||| || ||||||| |
ggu ggaguuu cu uucUGGGAUA GUUAUAACG GA gauggga c c
------- acuucuuaug u u UUC U U - u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr15: 400264-400384 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from gga-mir-454
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gga-miR-454-5p
| Accession | MIMAT0007291 |
| Description | Gallus gallus gga-miR-454-5p mature miRNA |
| Sequence | 14 - UCCUAACCUUAAGGAUGAG - 32 |
| Evidence |
experimental
cloned [1] |
Mature gga-miR-454-3p
| Accession | MIMAT0007292 |
| Description | Gallus gallus gga-miR-454-3p mature miRNA |
| Sequence | 72 - UAGUGCAAUAUUGCUUAUAGGGU - 94 |
| Evidence |
experimental
cloned [1-2], Illumina [3] |
| Database links |
|
| Predicted targets |
|
References
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