miRBase entry: oan-mir-1421ai

Stem-loop oan-mir-1421ai


Accession
MI0007002
Description
Ornithorhynchus anatinus oan-mir-1421ai precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

46 reads, 82 reads per million, 1 experiments
gcacggugugAGCAGGUCAGGUGUGGUGCAGUgugauaguggaauaUGCAUCAUGCGUGACCUCCcuacacagc
.....(((((.(.((((((.((((((((((.(((.........))))))))))))).)))))).).)))))...

Structure
gcacg     A C      G          G   gau 
     gugug G AGGUCA GUGUGGUGCA Ugu   a
     ||||| | |||||| |||||||||| |||   g
     cacau C UCCAGU CGUACUACGU aua   u
--cga     c C      G          -   agg 


Annotation confidence Not enough data
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Genome context
X1: 44301501-44301574 [-]
Clustered miRNAs
13 other miRNAs are < 10 kb from oan-mir-1421ai
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421ai-5p

Accession MIMAT0007305
Description Ornithorhynchus anatinus oan-miR-1421ai-5p mature miRNA
Sequence 11 - AGCAGGUCAGGUGUGGUGCAGU - 32
Evidence experimental
Illumina [1]

Mature oan-miR-1421ai-3p

Accession MIMAT0007306
Description Ornithorhynchus anatinus oan-miR-1421ai-3p mature miRNA
Sequence 47 - UGCAUCAUGCGUGACCUCC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004