Stem-loop sequence oan-mir-1421g-3

Accession MI0007006
Description Ornithorhynchus anatinus miR-1421g-3 stem-loop
Gene family MIPF0000564; mir-1421
Stem-loop 
g                 uca     agug  gg 
 ugugagggggucguacg   ugcag    au  c
 |||||||||||||||||   |||||    ||   
 acauuccuccagcgugu   acguc    ua  g
-                 gcc     -gua  gg
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Genome context
Coordinates (OANA5) Overlapping transcripts
Contig7160: 10086-10153 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-1421g-3
oan-mir-1421n-2 Contig7160: 19257-19349 [-]
oan-mir-1421t Contig7160: 17958-18074 [-]
oan-mir-1421s Contig7160: 17153-17253 [-]
oan-mir-1421p-2 Contig7160: 16442-16565 [-]
oan-mir-1421ak Contig7160: 15306-15387 [-]
oan-mir-1421i-3 Contig7160: 14496-14562 [-]
oan-mir-1421r Contig7160: 13915-14033 [-]
oan-mir-1421q Contig7160: 13103-13216 [-]
oan-mir-1421p-1 Contig7160: 12428-12492 [-]
oan-mir-1421i-2 Contig7160: 11366-11432 [-]
oan-mir-1421o Contig7160: 10811-10906 [-]
oan-mir-1421g-3 Contig7160: 10086-10153 [-]
oan-mir-1421k-2 Contig7160: 9501-9619 [-]
oan-mir-1421l-2 Contig7160: 8702-8788 [-]
oan-mir-1421n-1 Contig7160: 7381-7494 [-]
oan-mir-1421m Contig7160: 5522-5642 [-]
oan-mir-1419a Contig7160: 5129-5224 [-]
oan-mir-1421g-2 Contig7160: 3551-3650 [-]
oan-mir-1421k-3 Contig7160: 2982-3100 [-]
oan-mir-1421l-1 Contig7160: 1639-1731 [-]
oan-mir-1421k-1 Contig7160: 751-869 [-]
Database links

Mature sequence oan-miR-1421g-5p

Accession MIMAT0006975
Previous IDs oan-miR-1421g
Sequence

6 -  

agggggucguacgucaugcaga

 - 27

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Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).