miRBase entry: odi-mir-1472

Stem-loop odi-mir-1472


Accession
MI0007083
Description
Oikopleura dioica odi-mir-1472 precursor miRNA


Sequence

cgcuuuucaaauagacuugcugaaaaguagagaaaaugagcgguuuugaaaauccagugacaacuUGGCAGUAAGAUGAUUUAGUACCcuuaauaaaacuugu
.((((((((...........))))))))........((((.(((.(((((.(((.(.((.((...)).)).)..)))..))))).)))))))...........

Structure
cgcuuuucaaauagacuugcugaaaaguagagaaaa    c   u     -a   -c g  a  a 
                                    ugag ggu uugaa  auc  a ug ca  
                                    |||| ||| |||||  |||  | || || c
                                    auuc CCA GAUUU  UAG  U AC GU  
-------------------------uguucaaaaua    -   U     AG   AA G  G  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1472

Accession MIMAT0006023
Description Oikopleura dioica odi-miR-1472 mature miRNA
Sequence 66 - UGGCAGUAAGAUGAUUUAGUACC - 88
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080