miRBase entry: odi-mir-1475

Stem-loop odi-mir-1475


Accession
MI0007086
Description
Oikopleura dioica odi-mir-1475 precursor miRNA


Sequence

gauaaugagucgcauccguccuaaguuuauuaugugaccuacagaucaaaaagauaaaaugauucUCUGGGCACAGGUAAACUUUGacgagcgagcucacg
.....((((((((...((((..((((((((..((((.((((.((((((...........))).))).)))))))).)))))))).)))).)))).))))..

Structure
gauaa    -    auc    cu        ua    a    c   -   aaaa 
     ugag ucgc   cguc  aaguuuau  ugug ccua aga uca    g
     |||| ||||   ||||  ||||||||  |||| |||| ||| |||    a
     acuc agcg   gcaG  UUCAAAUG  ACAC GGGU Ucu agu    u
---gc    g    --a    -U        -G    -    C   u   aaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1475

Accession MIMAT0006026
Description Oikopleura dioica odi-miR-1475 mature miRNA
Sequence 66 - UCUGGGCACAGGUAAACUUUG - 86
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080