miRBase entry: odi-mir-1480

Stem-loop odi-mir-1480


Accession
MI0007091
Description
Oikopleura dioica odi-mir-1480 precursor miRNA


Sequence

ucuucuuguugacucGGUGGCUCAUUCUCGGCUUGUGUCagaauuauugcugauccgaaaugaucgugaucagaaggauaaaaaugauaacaagcauucuagaa
..............................((((((((((...(((((.(((((((((.....))).))))))...)))))...)))).)))))).........

Structure
ucuucuuguugacucGGUGGCUCAUUCUCG      -    gaa     --g      -   a 
                              GCUUGU GUCa   uuauu   cugauc cga a
                              |||||| ||||   |||||   |||||| ||| u
                              cgaaca uagu   aauag   gacuag gcu g
---------------------aagaucuua      a    aaa     gaa      u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1480

Accession MIMAT0006032
Description Oikopleura dioica odi-miR-1480 mature miRNA
Sequence 16 - GGUGGCUCAUUCUCGGCUUGUGUC - 39
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080