miRBase entry: odi-mir-1482

Stem-loop odi-mir-1482


Accession
MI0007093
Description
Oikopleura dioica odi-mir-1482 precursor miRNA


Sequence

uugaugccgagacgcUUGAACUUCUCAGGAACAGGCUAGacugguauauccugcaaacgagagaagccuauuucagagguuugaacacauuagcacaacaacuc
(((.(((.((...(.((((((((((..((((.(((((...((.((...........)).))...))))).)))))))))))))).)...)).))))))......

Structure
------   a   c  gac c          CA    C     AGa  g  auau 
      uug ugc ga   g UUGAACUUCU  GGAA AGGCU   cu gu    c
      ||| ||| ||   | ||||||||||  |||| |||||   || ||    c
      aac acg uu   c aguuuggaga  cuuu uccga   ga ca    u
cucaac   -   a  aca a          --    a     aga  g  aacg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1482

Accession MIMAT0006034
Description Oikopleura dioica odi-miR-1482 mature miRNA
Sequence 16 - UUGAACUUCUCAGGAACAGGCUAG - 39
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080